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Bjoern Peters

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  • Query for epitope within a longer sequence

    Thanks for your help on my previous request. New question: Does IEDB provide a tool for epitope search of known currated MHC binding epitopes in a whole protein? For example, say I input the seq...

  • Swine flu epitope analysis version 2.0 (2009)

    What epitopes does the human immune system recognize in swine flu? This forum post contains a summary of our analysis of swine flu epitopes.The definite version (2.0) has been published in PNAS as...

  • How do I get all epitopes from a protein sequence

    Question: We want to find all possible epitopes (against human IgA, IgG, IgM, IgE and IgD) in the PDB structure 2AIZ, whose sequence is:     Mnkfvksllvagsvaalaacsssnndaagngaaqtfggysvadlqqrynt...

  • Download copy of epitope conservancy tool

    Question: I would like to use the epitope conservancy tool to run a set of potential epitopes against several genomes. The tool does not handle an entire genome (eg NC_009782 Downloaded from NCBI) ...