J. Greenbaum

Major updates: New tool: Peptide eXpression annotator (pepX) helps to estimate tissue-specific peptide abundance from public RNA-Seq data NetMHCIIpan 4.1 has been incorporated into the MHC II bind...

We are excited to announce that the initial release of the Next-Generation IEDB Tools Website is now open to the public!  This is a complete redesign of the IEDB Analysis Resource with an emphasis ...

NEW: AxelF tool to enhance MHC-peptide binding predictions using expression data TCRMatch updated to version 1.0.2 with a significant speed increase Immunomebrowser chart download enabled Log4j vu...

NEW: TCRMatch tool added for prediction of TCR specificity based on sequence similarity to TCRs with known specificity Deimmunization tool stability updates Addressed issue whereby examples would ...

NEW: NetMHCpan 4.1 (EL and BA) incorporated into mhci binding web, API, and standalone tools NEW: NetMHCIIpan 4.0 (EL and BA) incorporated into mhcii binding web, API, and standalone tools

  All code ported from Python 2 to Python 3, including standalone packages (Python 3.6 or higher is required.) The 'IEDB recommended' method for mhci binding predictions has changed to  NetMHCpan ...

NEW: Docktope is incorporated as a new tool Class II binding predictor now allows predicting for various lengths (11-30) NetMHCIIpan 3.2 and NetMHCII 2.3 have been added to the class II binding pr...

NEW: Standalone Immunome Browser tool that allows users to map epitope sequences to proteins and visualize assay data NEW: MHC II NP - Prediction of naturally processed MHC II ligands Performance ...

v2.19 - April 2018 MHC class I binding: netMHCpan 4.0 incorporated as an option length-rescaling for netMHCpan 2.8 has been incorpored added the ability to select previous versions of several too...

  Individual epitope results re-incorporated into the Population coverage tool More efficient routing of prediction requests for MHC class I and II binding predictions to improve user experience (...