J. Greenbaum

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Activity overview

Latest activity by J. Greenbaum
  • J. Greenbaum created an article,

    Next-Generation IEDB Tools Website and API - Release 3.2

    Release 3.2 of the Next-Generation IEDB Tools Website is now live!  This release brings a major update to the PVC tool, allowing for class II predictions, as well as other enhancements throughout. ...

  • J. Greenbaum created an article,

    Update: Legacy Tools migration from HTTP to HTTPS

    We’ve recently upgraded our Legacy Tools website (https://tools.iedb.org) and APIs (https://tools-cluster-interface.iedb.org) to use HTTPS instead of HTTP. This change improves security by encrypti...

  • J. Greenbaum created an article,

    Next-Generation IEDB Tools Website and API - Release 3.1

    Release 3.1 of the Next-Generation IEDB Tools Website is now live!  This release brings the Patient Harmonic mean Best Rank and MHCII-NP methods to the site, as well as minor enhancements throughou...

  • J. Greenbaum created an article,

    Next-Generation IEDB Tools Website and API - Release 3.0

    Release 3.0 of the Next-Generation IEDB Tools Website is now live!  This release brings all of the T cell class II binding, elution, and immunogenicity tools to the site as well as ICERFIRE and var...

  • J. Greenbaum created an article,

    Next-Generation IEDB Tools Website and API - Release 2.0

    Release 2.0 of the Next-Generation IEDB Tools Website is now live!  This release includes three new applications developed to support the Cancer Epitope Database and Analysis Resource (CEDAR).  Hea...

  • J. Greenbaum created an article,

    IEDB Analysis Resource v2.28 release notes (26 Apr 2024)

    NetMHCIIpan 4.2  and NetMHCIIpan 4.3 incorporated into mhcii binding web, API, and standalone tools [Bugfix] Axel-F supports FASTA files as input Minor releases since 2.28: v2.28.1 Allele refere...

  • J. Greenbaum created an article,

    Next-Generation IEDB Tools Website and API - Release 1.2

    Release 1.2 of the Next-Generation IEDB Tools Website is now live!  This release includes several new algorithms added to the T Cell Class I tool, as well as the initial public release of our updat...

  • J. Greenbaum created an article,

    Next-Generation IEDB Tools Website and API - Release 1.1

    Release 1.1 of the Next-Generation IEDB Tools Website is now live!  The main feature of this release is the migration of all computation to a compute cluster with 120 CPUs available.  This release ...

  • J. Greenbaum created an article,

    IEDB Analysis Resource v2.27 release notes (25 May 2023)

    Major updates: New tool: Peptide eXpression annotator (pepX) helps to estimate tissue-specific peptide abundance from public RNA-Seq data NetMHCIIpan 4.1 has been incorporated into the MHC II bind...

  • J. Greenbaum created an article,

    Next-Generation IEDB Tools Website and API - Release 1.0

    We are excited to announce that the initial release of the Next-Generation IEDB Tools Website is now open to the public!  This is a complete redesign of the IEDB Analysis Resource with an emphasis ...