IEDB Analysis Resource v2.9 release notes (22 May 2013)

v2.9 - May 2013

MHC I/II binding & processing (web)

• Each tool has been ported into the Django framework in order to improve consistency throughout the site as well as enhance maintainability of the code
• NetMHCpan updated to version 2.8
• NetMHC (ANN) updated to version 3.4
• 45 additional class I alleles added to SMM and SMMPMBEC from human, cow, macaque, rat, and pig
• new matrices for SMM and SMMPMBEC available for download
• ARB method has been removed
• Citations have been added to the results of the processing tool
• Percentile ranks of NetMHCpan have been corrected
• Formatting errors corrected in textual output
• Broken links updated
• Rendering in Internet Explorer 10 has been fixed

MHC I/II binding (RESTful)

• Reimplemented to work with the Django interface
• Usage has been simplified by removing superfluous variables and shortening the URLs
• All bug fixes that apply to the web tools also apply to the RESTful tools

MHC I/II binding (standalone)

• All bug fixes and updates for the web tools also apply to the standalone tools

NetChop/NetCTL/NetCTLpan

• Sorting now works correctly in table output

ElliPro

• A standalone version of ElliPro has been made available for download

General

• Download tab has been added to every tool
• New 'Contribute' tab added to solicit tool submissions
• Internet Explorer has been dropped as a preferred browser in favor of Chrome