2021 IEDB Virtual User Workshop Presentations

PHOTO: 2021 IEDB Virtual User Workshop - Day 1 (28 October 2021) - Presenters on Zoom Webinar

Our team holds an annual user workshop in October/November to which we invite both those new to the IEDB as well as experienced users wanting to better understand and utilize this resource. The workshop is a great opportunity to learn about all the features of the IEDB database and tools, and to get hands-on individual support on how it can answer your research questions.

Following the success of the 2020 IEDB Virtual User Workshop, the IEDB hosted two virtual user workshops in 2021 to cater to the various time zones our users are in across the world.

Workshop 1:  Thursday, Oct. 28 - Friday, Oct. 29, 2021

                        8am - 2pm US Pacific Time

Workshop 2:  Wednesday, Nov. 3 - Thursday, Nov. 4, 2021

                        2pm – 8pm US Pacific Time

Each workshop was structured the same and contained identical information. These workshops were free of charge and were delivered virtually by Zoom Webinar. The available reference materials from the 2021 virtual event are outlined below.

Workshop Agenda (PDF Attachment)

• Attendee Agenda - 2021 IEDB Virtual User Workshop (Oct) - Final
• Attendee Agenda - 2021 IEDB Virtual User Workshop (Nov) - Final

Day 1 Presentations

1. Introduction & Immune Epitope Database Overview
   • Slides: 1.0 IEDB_Welcome&Logistics2021 (Final) and 1.1 Database_Overview2021 (Final)
   • Video: YouTube
2. Accessing the Data: Query, Reporting & Examples
   
   • Slides: 1.2 IEDB_QueryReportExamples2021 (Final)
   • Video: YouTube
3. SARS-CoV-2 and the ImmunomeBrowser
   
   • Slides: 1.3 IEDB_SARSImmunomeBrowser2021 (Final)
   • Video: YouTube
4. New Database Features - Query API & Custom Exports
   
   • Slides: 1.4 NewFeatures_IQ-API2021 (Final) and 1.4 NewFeatures_CustomExport (Final)
   • Video: YouTube
5. NIH Resources for Researchers: The LANL HIV Sequence Database
   
   • Slides: 1.5 HIVSequenceDB2021 (Final)
   • Video: YouTube
6. The Cancer Epitope Database and Analysis Resource (CEDAR)
   
   • Slides: 1.6 IEDB_CEDAR2021 (Final)
   • Video: YouTube
7. Immune Epitope Analysis Resource Overview
   • Slides: 1.7 IEDB_AnalysisResourceIntro2021 (Final)
   • Video: YouTube
8. Analysis Tools
   • Slides: 1.8 IEDB_AnalysisTools2021 (Final)
   • Video: YouTube
9. Day 1 Conclusion and Optional Q&A
   • Slides: 1.9 IEDB_Closing&Survey2021 (Final)
   • Video: YouTube

Day 2 Presentations

1. Introduction & MHC Binding Predictions
   
   • Slides: 2.0 IEDB_Welcome2021 (Final) and 2.1 IEDB_MHCBindingPredictions2021 (Final)
   • Video: YouTube
2. T Cell Processing & Immunogenicity Predictions
   
   • Slides: 2.2 IEDB_ProcessingImmunogenicity2021 (Final)
   • Video: YouTube
3. T Cell Tool Spotlight: TCRMatch
   • Slides: 2.3 IEDB_TCRMatch2021 (Final)
   • Video: Youtube
4. Structure Tools: LYRA & SCEptRe
   
   • Slides: 2.4 IEDB_LYRA.SCEptRe2021 (Final)
   • Video: Youtube
5. PEPMatch: Homology of SARS-CoV-2 Spike Sequences to Myocarditis Antigens
   
   • Slides: 2.5 IEDB_PEPMatch2021 (Final)
   • Video: Youtube
6. NIH Resources for Researchers: The LANL HIV Immunology Database
   
   • Slides: 2.6 HIVImmunologyDB2021 (Final)
   • Video: YouTube
7. B Cell Epitope Prediction
   
   • Slides: 2.7 IEDB_BCellEpitopePredictions2021 (Final)
   • Video: YouTube
8. IEDB Tools 3.0: Future of Tools
   • Slides: 2.8 IEDB_FutureOfTools2021 (Final)
   • Video: YouTube
9. Day 2 Conclusion and Optional Q&A
   • Slides: 2.9 IEDB_Closing&Survey2021 (Final)
   • Video: YouTube

Additional Resources Shared via Zoom

• Google Drive Folder - 2021 User Resources 

For more information on this or future events, contact us at iedb_workshop@lji.org or visit the informational webpage (http://workshop.iedb.org/).