2020 IEDB Virtual User Workshop Presentations

PHOTO: 2020 IEDB Virtual User Workshop - Day 1 (5 November 2020) - Presenters on Zoom Webinar

Our team holds an annual user workshop in October/November to which we invite both those new to the IEDB as well as experienced users wanting to better understand and utilize this resource. The workshop is a great opportunity to learn about all the features of the IEDB database and tools, and to get hands-on individual support on how it can answer your research questions. The available reference materials from the 2020 virtual event are outlined below.

Workshop Agenda (PDF Attachment)

• Attendee Agenda - 2020 IEDB User Workshop (Final)

Day 1 Presentations

1. Introduction & Immune Epitope Database Overview
   • Slides: 1.0 IEDB_Welcome&Logistics2020 (Final) and 1.1 Database_Overview2020 (Final)
   • Video: YouTube
2. How Data are Retrieved, Entered, and Organized
   • Slides: 1.2 IEDB_Data_Organized2020 (Final)
   • Video: YouTube
3. Accessing the Data: Query, Reporting & Examples
   
   • Slides: 1.3 IEDB_QueryReportExamples2020 (Final)
   • Video: YouTube
4. NIH Resources for Researchers: LANL COVID Pipeline
   
   • Slides: 1.4 LANL_COVIDPipeline-2020 (Final)
   • Video: YouTube
5. Immune Epitope Analysis Resource Overview
   • Slides: 1.5 IEDB_AnalysisResourceIntro2020 (Final)
   • Video: YouTube
6. Analysis Tools
   • Slides: 1.6 IEDB_AnalysisTools2020 (Final)
   • Video: YouTube
7. Using the IEDB-AR to Identify SARS-CoV-2 Candidates
   • Slides: 1.7 IEDB_SARSCoV2_2020 (Final)
   • Video: YouTube
8. Day 1 Conclusion and Optional Q&A
   • Slides: 1.8 IEDB_Closing&Survey2020 (Final)
   • Video: YouTube

Day 2 Presentations

1. Introduction & MHC Binding Predictions
   
   • Slides: 2.0 IEDB_Day2Welcome2020 (Final) and 2.1 IEDB_MHCBindingPredictions2020 (Final)
   • Video: YouTube
2. T Cell Processing & Immunogenicity Predictions
   
   • Slides: 2.2 IEDB_ProcessingImmunogenicity2020 (Final)
   • Video: YouTube
3. T Cell Tool Spotlight: TCRMatch
   • Slides: 2.3 IEDB_TCRMatch2020 (Final)
   • Video: Youtube
4. Structure Tools: LYRA & SCEptRe
   
   • Slides: 2.4 IEDB_LYRA.SCEptRe2020 (Final)
   • Video: Youtube
5. NIH Resources for Researchers: HIV Sequence & Immunology Databases
   
   • Slides: 2.5 HIV-ImmunoDB2020 (Final)
   • Video: YouTube
6. B Cell Epitope Prediction
   
   • Slides: 2.6 IEDB_BCellEpitopePredictions2020 (Final)
   • Video: YouTube
7. IEDB Tools 3.0: Future of Tools
   • Slides: 2.7 IEDB_FutureOfTools2020 (Final)
   • Video: YouTube
8. Day 2 Conclusion and Optional Q&A
   • Slides: 2.8 IEDB_Day2Closing&Survey2020 (Final)
   • Video: YouTube

Q&A Written Responses (PDF Attachment)

• User Workshop Q&A - Written Responses
• Note - these are a subset of the questions asked across the 2 days that were responded to in a written format via Zoom. The majority of questions were answered verbally, live on the day.

Additional Resources Shared via Zoom

• Google Drive Folder - 2020 User Resources 

For more information on this or future events, contact us at iedb_workshop@lji.org or visit the informational webpage (http://workshop.iedb.org/).